BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B09LP1|AL424915
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig938 1597 0.0
>3x_Contig938
Length = 2936
Score = 1597 bits (802), Expect = 0.0
Identities = 847/866 (97%)
Strand = Plus / Plus
Query: 1 gatcatcactgttaatcactgaagataggtaagaatagccgcagcagtttcacagttagt 60
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2046 gatcatcactgtgaatcactgaagataggtaagaatagccgcagcagtgtcacagttagt 2105
Query: 61 attcctgctgctgctgctgctgctgttactccgaagaaggacaatggtggtagcttcttt 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2106 attcctgctgctgctgctgctgctgtcactccgaagaaggacaatggtggtagcttcttt 2165
Query: 121 caatctttgttacctgccagagcaccagatcggataaagaccatgatgcaagaggataac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 caatctttgttacctgccagagcaccagatcggataaagaccatgatgcaagaggataac 2225
Query: 181 tcgaaaccaccggtagataacctaaaatcgaagcttttcaacagttaaacctccagttct 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2226 tcgaaaccaccggtagataacctaaaatcgaagcttttcaacagtaaaacctccagttct 2285
Query: 241 cgtgtagctatcgataaactacggcattttttcgccaagaacggtaaattattcgagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 cgtgtagctatcgataaactacggcattttttcgccaagaacggtaaattattcgagagt 2345
Query: 301 tagawatctactaccaaattttcttctgccaatwagctaatacaagtyactaagatgaag 360
||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 2346 aagaaatctactaccaaattttcttctgccaataagctaatacaagtcactaagatgaag 2405
Query: 361 cgcactgcaaagggagatgattctatccctgtcgcaaatagaatatacgcatggtgttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 cgcactgcaaagggagatgattctatccctgtcgcaaatagaatatacgcatggtgttac 2465
Query: 421 gtggtggcggactcttcggataagaaacccatcgcgaattaagtgttcataaatwagatg 480
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 2466 gtggtggcggactcttcggataagaaacccatcgcgaatgaagtgttcataaataagatg 2525
Query: 481 tggccaattggaagagctttggattccttggcatctgtgctaaacgtgaaawattcaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2526 tggccaattggaagagctttggattccttggcatctgtgctaaacgtgaaaaattcaaac 2585
Query: 541 atcgaccattcgatatcaacagatgagaagttatttttgtacaaaggtgatgcttctact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2586 atcgaccattcgatatcaacagatgagaagttatttttgtacaaaggtgatgcttctact 2645
Query: 601 cagcatctattaccctcgagtgcgcgagttaatgccaccatccaggaaggtgatacttta 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2646 cagcatctattaccctcgagtgcgcgagtcaatgccaccatccaggaaggtgatacttta 2705
Query: 661 tatttggtaagagggttaggtcgatgattgchacgccgcgtaatggaatctgaaggataa 720
||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||
Sbjct: 2706 tatttggtaagagggttaggtcgatgattgcaacgccgcgtaattggatctgaaggataa 2765
Query: 721 aatagcacattcttttggtctttacttatagcatagttcatgtagtttcgtaattacgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2766 aatagcacattcttttggtctttacttatagcatagttcatgtagtttcgtaattacgtc 2825
Query: 781 ttacagtcaaacacaatgacacttgtcacgtgacagattaagttgtcgaaacattactgc 840
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2826 ttacagtcaaacacaatgacacttgtcacgtgacagattatgttgtcgaaacattactgc 2885
Query: 841 atcaagctacagacatggtaccagcc 866
|||| || ||||||||||||| ||||
Sbjct: 2886 atcatgcaacagacatggtacaagcc 2911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6626
Number of Sequences: 1807
Number of extensions: 6626
Number of successful extensions: 332
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)